Colabomycin A

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Colabomycin A
Category Antibiotics
Catalog number BBF-01036
CAS 117778-57-1
Molecular Weight 530.57
Molecular Formula C30H30N2O7

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Description

It is produced by the strain of Streptomyces griseoflavus. It has anti-gram-positive bacterial activity similar to Manumycin, and has the activity of inhibiting leukemic cell L1210. IC50 is 3.4 μg/mL.

Specification

Synonyms (2E,4E,6E,8E)-N-[(1beta,6beta)-5alpha-Hydroxy-5-[(1E,3E,5E,7E)-9-[(2-hydroxy-5-oxo-1-cyclopentene-1-yl)amino]-9-oxo-1,3,5,7-nonatetrenyl]-2-oxo-7-oxabicyclo[4.1.0]hepta-3-ene-3-yl]-2,4,6,8-decatetrenamide
IUPAC Name (2E,4E,6E,8E)-N-[(1S,5S,6R)-5-hydroxy-5-[(1E,3E,5E,7E)-9-[(2-hydroxy-5-oxocyclopenten-1-yl)amino]-9-oxonona-1,3,5,7-tetraenyl]-2-oxo-7-oxabicyclo[4.1.0]hept-3-en-3-yl]deca-2,4,6,8-tetraenamide
Canonical SMILES CC=CC=CC=CC=CC(=O)NC1=CC(C2C(C1=O)O2)(C=CC=CC=CC=CC(=O)NC3=C(CCC3=O)O)O
InChI InChI=1S/C30H30N2O7/c1-2-3-4-5-6-9-12-15-24(35)31-21-20-30(38,29-28(39-29)27(21)37)19-14-11-8-7-10-13-16-25(36)32-26-22(33)17-18-23(26)34/h2-16,19-20,28-29,33,38H,17-18H2,1H3,(H,31,35)(H,32,36)/b3-2+,5-4+,9-6+,10-7+,11-8+,15-12+,16-13+,19-14+/t28-,29-,30+/m1/s1
InChI Key AVDIDFMWHMQFHM-ZNVBZEEFSA-N

Properties

Appearance White Powder
Antibiotic Activity Spectrum Gram-positive bacteria; Neoplastics (Tumor)
Boiling Point 917.4 °C at 760 mmHg
Melting Point > 280 °C
Density 1.32 g/cm3
Solubility Soluble in Methanol

Reference Reading

1. Metabolic products of microorganisms. 245. Colabomycins, new antibiotics of the manumycin group from Streptomyces griseoflavus. II. Structure of colabomycin A
R Grote, A Zeeck, J M Beale Jr J Antibiot (Tokyo). 1988 Sep;41(9):1186-95. doi: 10.7164/antibiotics.41.1186.
The structure of colabomycin A (1) was elucidated by a detailed spectroscopic analysis. Two-dimensional NMR spectroscopy experiments provided assignments of the proton and carbon resonances of the tetraene carboxamide chains occurring in 1. The configurations of eight out of nine double bonds were determined by analysis of their coupling constants. The absolute configurations of C-4 (4S), C-5 (5R) and C-6 (6S) were established from the CD spectra of the parent compound and of 2-(6-oxo-2,4-hexadienoylamino)-5,6-epoxy-1,4-benzoquinone (2), which was obtained from 1 by mild chromic acid oxidation.
2. Metabolic products of microorganisms. 244. Colabomycins, new antibiotics of the manumycin group from Streptomyces griseoflavus. I. Isolation, characterization and biological properties
R Grote, A Zeeck, H Drautz, H Zähner J Antibiot (Tokyo). 1988 Sep;41(9):1178-85. doi: 10.7164/antibiotics.41.1178.
The yellow colabomycins A to C, three new antibiotics of the manumycin group produced by Streptomyces griseoflavus (strain Tü 2880), were detected by chemical screening. They were isolated from mycelium extracts by column chromatography on various adsorbents, followed by preparative reversed phase HPLC. The main compound, colabomycin A (1), was characterized and shown to be chiefly biologically active against Gram-positive bacteria and stem cells of murine L1210 leukemia.
3. Influence of increased dissolved oxygen concentration on productivity and selectivity in cultures of a colabomycin-producing strain of Streptomyces griseoflavus
O Dick, U Onken, I Sattler, A Zeeck Appl Microbiol Biotechnol. 1994 Jun;41(4):373-7. doi: 10.1007/BF00939022.
The influence of enhanced O2 concentration on growth and formation of secondary metabolites by Streptomyces griseoflavus (strain Tü 2880) was investigated in a stirred tank and in an air-lift fermentor. At a partial pressure of O2 Po2 = 1880 mbar the growth was lowered by 50% compared to Po2 = 210 mbar, whilst substrate consumption and O2 uptake rate increased markedly. Production of the colabomycin complex reached maximum values at Po2 = 630 mbar. A similar increase of secondary metabolite formation was obtained when glycerol or acetate were fed at Po2 = 220 mbar. The portion of the derivate colabomycin A in the product mixture rose from 43% at Po2 = 210 mbar to 73% at Po2 = 1260 mbar. Since dissolved O2 concentration has a significant influence on productivity and selectivity it may be used to regulate aerobic fermentation processes.

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