Norplicacetin

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Category Antibiotics
Catalog number BBF-02137
CAS
Molecular Weight 503.55
Molecular Formula C24H33N5O7

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Description

It is originally isolated from Str. plicatus NCIB 11305. And it has the effect of anti-gram-positive bacteria and mycobacterium.

Specification

IUPAC Name 4-amino-N-[1-[(2R,5S,6R)-5-[(2R,3R,4S,5S,6R)-3,4-dihydroxy-6-methyl-5-(methylamino)oxan-2-yl]oxy-6-methyloxan-2-yl]-2-oxopyrimidin-4-yl]benzamide
Canonical SMILES CC1C(CCC(O1)N2C=CC(=NC2=O)NC(=O)C3=CC=C(C=C3)N)OC4C(C(C(C(O4)C)NC)O)O
InChI InChI=1S/C24H33N5O7/c1-12-16(36-23-21(31)20(30)19(26-3)13(2)35-23)8-9-18(34-12)29-11-10-17(28-24(29)33)27-22(32)14-4-6-15(25)7-5-14/h4-7,10-13,16,18-21,23,26,30-31H,8-9,25H2,1-3H3,(H,27,28,32,33)/t12-,13-,16+,18-,19-,20+,21-,23-/m1/s1
InChI Key HJFXGPLQIPLHSS-UOUGBBRZSA-N

Properties

Appearance White Acicular Crystal
Antibiotic Activity Spectrum Gram-positive bacteria; mycobacteria
Melting Point 168-171°C

Reference Reading

1. Characterization of the amicetin biosynthesis gene cluster from Streptomyces vinaceusdrappus NRRL 2363 implicates two alternative strategies for amide bond formation
Gaiyun Zhang, Haibo Zhang, Sumei Li, Ji Xiao, Guangtao Zhang, Yiguang Zhu, Siwen Niu, Jianhua Ju, Changsheng Zhang Appl Environ Microbiol. 2012 Apr;78(7):2393-401. doi: 10.1128/AEM.07185-11. Epub 2012 Jan 20.
Amicetin, an antibacterial and antiviral agent, belongs to a group of disaccharide nucleoside antibiotics featuring an α-(1→4)-glycoside bond in the disaccharide moiety. In this study, the amicetin biosynthesis gene cluster was cloned from Streptomyces vinaceusdrappus NRRL 2363 and localized on a 37-kb contiguous DNA region. Heterologous expression of the amicetin biosynthesis gene cluster in Streptomyces lividans TK64 resulted in the production of amicetin and its analogues, thereby confirming the identity of the ami gene cluster. In silico sequence analysis revealed that 21 genes were putatively involved in amicetin biosynthesis, including 3 for regulation and transportation, 10 for disaccharide biosynthesis, and 8 for the formation of the amicetin skeleton by the linkage of cytosine, p-aminobenzoic acid (PABA), and the terminal (+)-α-methylserine moieties. The inactivation of the benzoate coenzyme A (benzoate-CoA) ligase gene amiL and the N-acetyltransferase gene amiF led to two mutants that accumulated the same two compounds, cytosamine and 4-acetamido-3-hydroxybenzoic acid. These data indicated that AmiF functioned as an amide synthethase to link cytosine and PABA. The inactivation of amiR, encoding an acyl-CoA-acyl carrier protein transacylase, resulted in the production of plicacetin and norplicacetin, indicating AmiR to be responsible for attachment of the terminal methylserine moiety to form another amide bond. These findings implicated two alternative strategies for amide bond formation in amicetin biosynthesis.

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