Pyracrimycin A

Pyracrimycin A

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Category Antibiotics
Catalog number BBF-02085
CAS 35663-85-5
Molecular Weight 138.17
Molecular Formula C7H10N2O
Purity >98%

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Description

Pyracrimycin A is an antibacterial antibiotic produced by Str. eridani. It has activity against gram-positive bacteria, gram-negative bacteria and mycobacteria.

Specification

Synonyms Cyclamidomycin; Desdanine
Storage Store at -20°C
IUPAC Name (E)-3-(3,4-dihydro-2H-pyrrol-5-yl)prop-2-enamide
Canonical SMILES C1CC(=NC1)C=CC(=O)N
InChI InChI=1S/C7H10N2O/c8-7(10)4-3-6-2-1-5-9-6/h3-4H,1-2,5H2,(H2,8,10)/b4-3+
InChI Key SJFPWBFXBOZGTB-ONEGZZNKSA-N

Properties

Appearance Colorless Crystal
Antibiotic Activity Spectrum Gram-positive bacteria; Gram-negative bacteria; mycobacteria
Boiling Point 299°C at 760 mmHg
Melting Point 215-217°C (dec.)
Density 1.19 g/cm3
Solubility Soluble in DMSO

Reference Reading

1. Identification of the Biosynthetic Gene Cluster for Pyracrimycin A, an Antibiotic Produced by Streptomyces sp
Julie B Nielsen, Tetiana Gren, Omkar S Mohite, Tue S Jørgensen, Andreas K Klitgaard, Anna-Sophie Mourched, Kai Blin, Daniel Oves-Costales, Olga Genilloud, Thomas O Larsen, David Tanner, Tilmann Weber, Charlotte H Gotfredsen, Pep Charusanti ACS Chem Biol. 2022 Sep 16;17(9):2411-2417. doi: 10.1021/acschembio.2c00480. Epub 2022 Aug 30.
Actinomycetes make a wealth of complex, structurally diverse natural products, and a key challenge is to link them to their biosynthetic gene clusters and delineate the reactions catalyzed by each of the enzymes. Here, we report the biosynthetic gene cluster for pyracrimycin A, a set of nine genes that includes a core nonribosomal peptide synthase (pymB) that utilizes serine and proline as precursors and a monooxygenase (pymC) that catalyzes Baeyer-Villiger oxidation. The cluster is similar to the one for brabantamide A; however, pyracrimycin A biosynthesis differs in that feeding experiments with isotope-labeled serine and proline suggest that a ring opening reaction takes place and a carbon is lost from serine downstream of the oxidation reaction. Based on these data, we propose a full biosynthesis pathway for pyracrimycin A.
2. [Some compounds correlated to pyracrimycin A]
B Cavalleri, G Volpe, R Pallanza Farmaco Sci. 1975 Feb;30(2):110-21.
Some biological characteristics of pyracrimycin A (I), a metabolic compound isolated from cultures of Streptomyces eridani are examined. Some other compounds related to I, obtained both by chemical reaction from the natural product and by synthesis are described. The in vitro antibacterial activity seems to be due to the presence of the unsaturated moiety --N equals (see article) --CH equals CH-- (see article) equals O.

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