Roxithromycin Impurity C

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Roxithromycin Impurity C
Category Bioactive by-products
Catalog number BBF-04633
CAS 13127-18-9
Molecular Weight 748.94
Molecular Formula C37H68N2O13
Purity >95%

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Description

An impurity found in the macrolide antibiotic, Clarithromycin. It exhibits antibacterial properties.

Specification

Synonyms 9-Erythromycin 9-Oxime; 9-Erythromycin A Oxime; Erythromycin Oxime; Roxithromycin Impurity C; Clarithromycin EP Impurity J
Storage Store at -20°C under inert atmosphere
IUPAC Name (3R,4S,5S,6R,7R,9R,10Z,11S,12R,13S,14R)-6-[(2S,3R,4S,6R)-4-(dimethylamino)-3-hydroxy-6-methyloxan-2-yl]oxy-14-ethyl-7,12,13-trihydroxy-10-hydroxyimino-4-[(2R,4R,5S,6S)-5-hydroxy-4-methoxy-4,6-dimethyloxan-2-yl]oxy-3,5,7,9,11,13-hexamethyl-oxacyclotetradecan-2-one
Canonical SMILES CCC1C(C(C(C(=NO)C(CC(C(C(C(C(C(=O)O1)C)OC2CC(C(C(O2)C)O)(C)OC)C)OC3C(C(CC(O3)C)N(C)C)O)(C)O)C)C)O)(C)O
InChI InChI=1S/C37H68N2O13/c1-14-25-37(10,45)30(41)20(4)27(38-46)18(2)16-35(8,44)32(52-34-28(40)24(39(11)12)15-19(3)48-34)21(5)29(22(6)33(43)50-25)51-26-17-36(9,47-13)31(42)23(7)49-26/h18-26,28-32,34,40-42,44-46H,14-17H2,1-13H3/b38-27-/t18-,19-,20+,21+,22-,23+,24+,25-,26+,28-,29+,30-,31+,32-,34+,35-,36-,37-/m1/s1
InChI Key KYTWXIARANQMCA-PGYIPVOXSA-N

Properties

Appearance White to Off-white Solid
Antibiotic Activity Spectrum Bacteria
Boiling Point 841.0±65.0°C (Predicted)
Melting Point >159°C (dec.)
Density 1.28±0.1 g/cm3 (Predicted)
Solubility Slightly soluble in Chloroform, DMSO, Ethanol, Methanol

Reference Reading

1. Characterization of two unknown impurities in roxithromycin by 2D LC-QTOF/MS/MS and NMR
Yu Xu, Bingqi Zhu, Jinjin Zhou, Jian Wang, Yong Jin J Pharm Biomed Anal . 2020 May 30;184:113196. doi: 10.1016/j.jpba.2020.113196.
Two unknown impurities in roxithromycin were discovered and preliminarily characterized by two-dimensional liquid chromatography coupled with QTOF mass analyzer (2D LC-QTOF MS/MS). The column-switching technique of 2D LC made the chromatographic conditions in official standard of roxithromycin compatible with mass spectrometric detector. The complete MS/MS fragmentation patterns of the impurities were studied to obtain structural information of these impurities. Furthermore, these two impurities were separated and purified by preparative HPLC, and their structures were confirmed by 1D and 2D nuclear magnetic resonance (NMR). Structural elucidation of two impurities by1H NMR,13C NMR, the1H-1H COSY, HSQC and HMBC NMR spectra has been discussed. Based on high resolution MS/MS and NMR data, the structures of these two impurities were elucidated respectively as 11-O-[(2-Methoxyethoxy) methyl] roxithromycin and de(N-methyl)-N-formyl roxithromycin. In addition, the mechanisms for formation of the impurities were also proposed.

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